Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 AC009237.14-201ENST00000609975 1594 ntBASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM56Q9BRZ2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.02■□□□□ 0.79
TRIM56Q9BRZ2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 AL589743.5-201ENST00000616611 1050 ntBASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM56Q9BRZ2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 RAP2CP1-201ENST00000605103 478 ntBASIC20■□□□□ 0.79
TRIM56Q9BRZ2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM56Q9BRZ2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 MIR663A-201ENST00000385250 93 ntBASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 KRT16P6-202ENST00000425692 1426 ntBASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM56Q9BRZ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM56Q9BRZ2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms