Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 AC011484.1-201ENST00000377652 1995 ntBASIC18.19■□□□□ 0.5
TM9SF2Q99805 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 PNMA6B-201ENST00000538162 1200 ntBASIC18.19■□□□□ 0.5
TM9SF2Q99805 C2orf69P4-201ENST00000565394 541 ntBASIC18.19■□□□□ 0.5
TM9SF2Q99805 AC006058.3-201ENST00000606217 1069 ntBASIC18.19■□□□□ 0.5
TM9SF2Q99805 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 AC125437.2-201ENST00000625180 2167 ntBASIC18.18■□□□□ 0.5
TM9SF2Q99805 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 AL356652.1-201ENST00000615962 565 ntBASIC18.18■□□□□ 0.5
TM9SF2Q99805 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF2Q99805 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF2Q99805 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.17■□□□□ 0.5
TM9SF2Q99805 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TM9SF2Q99805 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF2Q99805 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 BX323043.1-201ENST00000641006 1765 ntBASIC18.16■□□□□ 0.5
TM9SF2Q99805 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF2Q99805 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF2Q99805 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms