Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 MFAP1P1-201ENST00000442257 1255 ntBASIC28.36■■■□□ 2.13
SCAF11Q99590 KRT18P16-201ENST00000510337 1294 ntBASIC28.36■■■□□ 2.13
SCAF11Q99590 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC28.36■■■□□ 2.13
SCAF11Q99590 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC28.36■■■□□ 2.13
SCAF11Q99590 AC131212.4-201ENST00000623606 975 ntBASIC28.36■■■□□ 2.13
SCAF11Q99590 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC28.36■■■□□ 2.13
SCAF11Q99590 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 BID-203ENST00000399765 1879 ntTSL 2 BASIC28.36■■■□□ 2.13
SCAF11Q99590 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
SCAF11Q99590 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SCAF11Q99590 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 CYGB-204ENST00000589342 815 ntTSL 3 BASIC28.35■■■□□ 2.13
SCAF11Q99590 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC28.35■■■□□ 2.13
SCAF11Q99590 AC116407.4-201ENST00000623319 1061 ntBASIC28.35■■■□□ 2.13
SCAF11Q99590 AC010653.2-201ENST00000623505 997 ntBASIC28.35■■■□□ 2.13
SCAF11Q99590 VPS72-207ENST00000640458 689 ntTSL 5 BASIC28.35■■■□□ 2.13
SCAF11Q99590 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SCAF11Q99590 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SCAF11Q99590 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SCAF11Q99590 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF11Q99590 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF11Q99590 CCR12P-201ENST00000446203 998 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 AC141257.4-201ENST00000634557 245 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 AC136944.6-201ENST00000634818 245 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF11Q99590 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF11Q99590 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
SCAF11Q99590 AC005332.1-201ENST00000577698 1310 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 H19-201ENST00000411754 1788 ntTSL 5 BASIC28.34■■■□□ 2.13
SCAF11Q99590 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SCAF11Q99590 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
SCAF11Q99590 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF11Q99590 AC007663.1-201ENST00000438948 1240 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC28.34■■■□□ 2.13
SCAF11Q99590 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF11Q99590 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC28.34■■■□□ 2.13
SCAF11Q99590 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
SCAF11Q99590 STK25-204ENST00000405585 1643 ntTSL 2 BASIC28.33■■■□□ 2.13
SCAF11Q99590 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC28.33■■■□□ 2.13
SCAF11Q99590 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC28.33■■■□□ 2.13
SCAF11Q99590 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SCAF11Q99590 SLC25A1P2-201ENST00000430693 912 ntBASIC28.33■■■□□ 2.13
SCAF11Q99590 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC28.33■■■□□ 2.13
SCAF11Q99590 AC011298.2-201ENST00000617989 482 ntBASIC28.33■■■□□ 2.13
SCAF11Q99590 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF11Q99590 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
SCAF11Q99590 FP700111.2-201ENST00000619190 1892 ntBASIC28.33■■■□□ 2.13
SCAF11Q99590 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF11Q99590 AC005229.4-201ENST00000610085 2198 ntBASIC28.32■■■□□ 2.12
SCAF11Q99590 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.32■■■□□ 2.12
SCAF11Q99590 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF11Q99590 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF11Q99590 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SCAF11Q99590 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF11Q99590 PP7080-204ENST00000510714 601 ntTSL 3 BASIC28.32■■■□□ 2.12
SCAF11Q99590 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC28.32■■■□□ 2.12
SCAF11Q99590 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF11Q99590 AC007225.1-201ENST00000566331 1836 ntBASIC28.32■■■□□ 2.12
SCAF11Q99590 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC28.31■■■□□ 2.12
SCAF11Q99590 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF11Q99590 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF11Q99590 AL671277.2-201ENST00000458060 996 ntBASIC28.31■■■□□ 2.12
SCAF11Q99590 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC28.31■■■□□ 2.12
SCAF11Q99590 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC28.31■■■□□ 2.12
SCAF11Q99590 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SCAF11Q99590 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF11Q99590 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF11Q99590 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
SCAF11Q99590 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCAF11Q99590 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC28.3■■■□□ 2.12
SCAF11Q99590 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC28.3■■■□□ 2.12
SCAF11Q99590 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms