Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 AC091390.4-202ENST00000476426 537 ntBASIC20.37■□□□□ 0.85
NOTCH4Q99466 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 SLC25A1P4-201ENST00000567977 778 ntBASIC20.37■□□□□ 0.85
NOTCH4Q99466 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 AC011298.2-201ENST00000617989 482 ntBASIC20.37■□□□□ 0.85
NOTCH4Q99466 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NOTCH4Q99466 FEM1AP1-201ENST00000431297 1995 ntBASIC20.36■□□□□ 0.85
NOTCH4Q99466 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 FAM87A-204ENST00000613235 858 ntBASIC20.36■□□□□ 0.85
NOTCH4Q99466 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
NOTCH4Q99466 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NOTCH4Q99466 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.35■□□□□ 0.85
NOTCH4Q99466 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 YBX1P2-201ENST00000489612 999 ntBASIC20.35■□□□□ 0.85
NOTCH4Q99466 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.35■□□□□ 0.85
NOTCH4Q99466 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.35■□□□□ 0.85
NOTCH4Q99466 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NOTCH4Q99466 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.35■□□□□ 0.85
NOTCH4Q99466 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 AL138966.2-201ENST00000621997 464 ntBASIC20.34■□□□□ 0.85
NOTCH4Q99466 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NOTCH4Q99466 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.34■□□□□ 0.85
NOTCH4Q99466 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.33■□□□□ 0.85
NOTCH4Q99466 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 AP001271.2-201ENST00000624018 1556 ntBASIC20.33■□□□□ 0.85
NOTCH4Q99466 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.33■□□□□ 0.85
NOTCH4Q99466 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NOTCH4Q99466 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NOTCH4Q99466 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NOTCH4Q99466 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NOTCH4Q99466 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NOTCH4Q99466 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.33■□□□□ 0.84
NOTCH4Q99466 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOTCH4Q99466 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOTCH4Q99466 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NOTCH4Q99466 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NOTCH4Q99466 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms