Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 AL158211.5-201ENST00000623583 2518 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 AC006557.6-201ENST00000623071 864 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 MYC-209ENST00000641252 345 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 AC133041.1-202ENST00000642053 222 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 AC092368.3-202ENST00000574180 1591 ntBASIC18.63■□□□□ 0.57
BBS4Q96RK4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.63■□□□□ 0.57
BBS4Q96RK4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BBS4Q96RK4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 AC073210.2-201ENST00000430369 194 ntBASIC18.62■□□□□ 0.57
BBS4Q96RK4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 HLA-B-256ENST00000639848 1089 ntBASIC18.62■□□□□ 0.57
BBS4Q96RK4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.62■□□□□ 0.57
BBS4Q96RK4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BBS4Q96RK4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 AC069152.1-201ENST00000438030 544 ntBASIC18.61■□□□□ 0.57
BBS4Q96RK4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 RNF165-205ENST00000588679 2904 ntBASIC18.61■□□□□ 0.57
BBS4Q96RK4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.61■□□□□ 0.57
BBS4Q96RK4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BBS4Q96RK4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 AC018553.1-201ENST00000616682 1458 ntBASIC18.6■□□□□ 0.57
BBS4Q96RK4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms