Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 AL691432.2-201ENST00000607222 2038 ntBASIC17.86■□□□□ 0.45
SNX18Q96RF0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 AC231657.2-201ENST00000624556 255 ntBASIC17.86■□□□□ 0.45
SNX18Q96RF0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SNX18Q96RF0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX18Q96RF0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 KRT18P68-201ENST00000392293 1000 ntBASIC17.85■□□□□ 0.45
SNX18Q96RF0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 NCF1B-203ENST00000435988 1254 ntBASIC17.85■□□□□ 0.45
SNX18Q96RF0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 AC069236.1-201ENST00000604339 616 ntBASIC17.85■□□□□ 0.45
SNX18Q96RF0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SNX18Q96RF0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNX18Q96RF0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.84■□□□□ 0.45
SNX18Q96RF0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 KRT8P17-201ENST00000453110 1448 ntBASIC17.84■□□□□ 0.45
SNX18Q96RF0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 AL031963.3-201ENST00000606441 850 ntBASIC17.84■□□□□ 0.45
SNX18Q96RF0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.84■□□□□ 0.45
SNX18Q96RF0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SNX18Q96RF0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX18Q96RF0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.83■□□□□ 0.45
SNX18Q96RF0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.83■□□□□ 0.45
SNX18Q96RF0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX18Q96RF0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX18Q96RF0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNX18Q96RF0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX18Q96RF0 GPX1P1-201ENST00000388829 606 ntBASIC17.83■□□□□ 0.44
SNX18Q96RF0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 CYP2T3P-201ENST00000601990 817 ntBASIC17.83■□□□□ 0.44
SNX18Q96RF0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX18Q96RF0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNX18Q96RF0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX18Q96RF0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX18Q96RF0 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.44
SNX18Q96RF0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX18Q96RF0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX18Q96RF0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX18Q96RF0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms