Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3IPQ96QF0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 OR6D1P-202ENST00000641007 5290 ntBASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IPQ96QF0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 WIZP1-201ENST00000531444 2299 ntBASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 AC061975.6-201ENST00000579045 1553 ntBASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB3IPQ96QF0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 AC006333.2-201ENST00000607957 2099 ntBASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IPQ96QF0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3IPQ96QF0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3IPQ96QF0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB3IPQ96QF0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.14■□□□□ 0.66
RAB3IPQ96QF0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.14■□□□□ 0.65
RAB3IPQ96QF0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms