Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 RN7SL471P-201ENST00000580476 299 ntBASIC16.38■□□□□ 0.21
GAFA1Q96PS6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 AL023875.1-201ENST00000640777 796 ntBASIC16.38■□□□□ 0.21
GAFA1Q96PS6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAFA1Q96PS6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 AC239809.2-201ENST00000415381 517 ntBASIC16.37■□□□□ 0.21
GAFA1Q96PS6 YBX1P10-201ENST00000444752 975 ntBASIC16.37■□□□□ 0.21
GAFA1Q96PS6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GAFA1Q96PS6 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.37■□□□□ 0.21
GAFA1Q96PS6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 NBPF21P-201ENST00000425093 1451 ntBASIC16.36■□□□□ 0.21
GAFA1Q96PS6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 KRASP1-201ENST00000407852 552 ntBASIC16.36■□□□□ 0.21
GAFA1Q96PS6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.36■□□□□ 0.21
GAFA1Q96PS6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 SLC25A24-204ENST00000569674 2357 ntBASIC16.35■□□□□ 0.21
GAFA1Q96PS6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 PRORSD1P-201ENST00000295112 541 ntBASIC16.35■□□□□ 0.21
GAFA1Q96PS6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 C1QBPP2-201ENST00000528754 825 ntBASIC16.35■□□□□ 0.21
GAFA1Q96PS6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.35■□□□□ 0.21
GAFA1Q96PS6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms