Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC46A1Q96NT5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC46A1Q96NT5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 ATP5G1P1-201ENST00000448724 379 ntBASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 EGLN1P1-201ENST00000531623 762 ntBASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC46A1Q96NT5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 MESTP1-201ENST00000404287 994 ntBASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 WWOX-216ENST00000569818 525 ntBASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 AC026271.3-201ENST00000571884 352 ntBASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 AP005242.2-201ENST00000580065 1175 ntBASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC46A1Q96NT5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 TSPY14P-201ENST00000303979 915 ntBASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 AL445675.2-201ENST00000620291 557 ntBASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SLC46A1Q96NT5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms