Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 SPDYE13P-201ENST00000445314 798 ntBASIC19.37■□□□□ 0.69
CFAP54Q96N23 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 AC027796.2-201ENST00000575326 344 ntBASIC19.37■□□□□ 0.69
CFAP54Q96N23 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP54Q96N23 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 AC010653.2-201ENST00000623505 997 ntBASIC19.37■□□□□ 0.69
CFAP54Q96N23 AL031432.5-201ENST00000641059 760 ntBASIC19.37■□□□□ 0.69
CFAP54Q96N23 KRT18P1-202ENST00000452408 1331 ntBASIC19.37■□□□□ 0.69
CFAP54Q96N23 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CFAP54Q96N23 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 AC079776.4-201ENST00000511039 504 ntBASIC19.36■□□□□ 0.69
CFAP54Q96N23 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP54Q96N23 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP54Q96N23 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP54Q96N23 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP54Q96N23 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP54Q96N23 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 AC092865.5-201ENST00000545435 363 ntBASIC19.35■□□□□ 0.69
CFAP54Q96N23 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP54Q96N23 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP54Q96N23 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CFAP54Q96N23 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 MFAP1P1-201ENST00000442257 1255 ntBASIC19.34■□□□□ 0.69
CFAP54Q96N23 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.34■□□□□ 0.69
CFAP54Q96N23 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 AC233723.2-201ENST00000623798 2106 ntBASIC19.34■□□□□ 0.69
CFAP54Q96N23 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CFAP54Q96N23 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP54Q96N23 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 YBX1P10-201ENST00000444752 975 ntBASIC19.33■□□□□ 0.69
CFAP54Q96N23 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.69
CFAP54Q96N23 AF228730.7-201ENST00000641842 219 ntBASIC19.33■□□□□ 0.69
CFAP54Q96N23 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP54Q96N23 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP54Q96N23 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.33■□□□□ 0.69
CFAP54Q96N23 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP54Q96N23 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms