Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 AP002982.1-201ENST00000492365 877 ntBASIC16.01■□□□□ 0.15
ZNF48Q96MX3 NUDT16P1-203ENST00000513809 620 ntBASIC16.01■□□□□ 0.15
ZNF48Q96MX3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF48Q96MX3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16■□□□□ 0.15
ZNF48Q96MX3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16■□□□□ 0.15
ZNF48Q96MX3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16■□□□□ 0.15
ZNF48Q96MX3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
ZNF48Q96MX3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 RBM17P1-201ENST00000453646 1190 ntBASIC16■□□□□ 0.15
ZNF48Q96MX3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16■□□□□ 0.15
ZNF48Q96MX3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16■□□□□ 0.15
ZNF48Q96MX3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 REXO1L10P-201ENST00000615707 1290 ntBASIC16■□□□□ 0.15
ZNF48Q96MX3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
ZNF48Q96MX3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16■□□□□ 0.15
ZNF48Q96MX3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16■□□□□ 0.15
ZNF48Q96MX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16■□□□□ 0.15
ZNF48Q96MX3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF48Q96MX3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 FP700111.2-201ENST00000619190 1892 ntBASIC15.99■□□□□ 0.15
ZNF48Q96MX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AC079598.2-202ENST00000546624 1451 ntBASIC15.99■□□□□ 0.15
ZNF48Q96MX3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AC073130.3-201ENST00000624389 2278 ntBASIC15.99■□□□□ 0.15
ZNF48Q96MX3 KRT8P17-201ENST00000453110 1448 ntBASIC15.99■□□□□ 0.15
ZNF48Q96MX3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF48Q96MX3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 KRT8P9-201ENST00000558927 1449 ntBASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 AP000525.1-201ENST00000608286 694 ntBASIC15.98■□□□□ 0.15
ZNF48Q96MX3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms