Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 AL390719.1-204ENST00000412397 1219 ntBASIC19.41■□□□□ 0.7
CCDC138Q96M89 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC138Q96M89 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC138Q96M89 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 AC005829.2-201ENST00000571422 1056 ntBASIC19.4■□□□□ 0.7
CCDC138Q96M89 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC138Q96M89 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC138Q96M89 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC138Q96M89 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CCDC138Q96M89 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC138Q96M89 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 HLA-B-256ENST00000639848 1089 ntBASIC19.39■□□□□ 0.69
CCDC138Q96M89 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.39■□□□□ 0.69
CCDC138Q96M89 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC138Q96M89 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC138Q96M89 AFG3L1P-217ENST00000557444 2447 ntBASIC19.39■□□□□ 0.69
CCDC138Q96M89 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC138Q96M89 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC138Q96M89 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC138Q96M89 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC138Q96M89 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms