Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
DDX11Q96FC9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX11Q96FC9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX11Q96FC9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.33■■□□□ 1.33
DDX11Q96FC9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
DDX11Q96FC9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX11Q96FC9 Z99916.2-201ENST00000604037 246 ntBASIC23.33■■□□□ 1.33
DDX11Q96FC9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX11Q96FC9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX11Q96FC9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
DDX11Q96FC9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX11Q96FC9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX11Q96FC9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX11Q96FC9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX11Q96FC9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX11Q96FC9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 AL158211.5-201ENST00000623583 2518 ntBASIC23.32■■□□□ 1.32
DDX11Q96FC9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 AC006557.6-201ENST00000623071 864 ntBASIC23.32■■□□□ 1.32
DDX11Q96FC9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
DDX11Q96FC9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX11Q96FC9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 MIR4497-201ENST00000583208 89 ntBASIC23.31■■□□□ 1.32
DDX11Q96FC9 AC120498.8-201ENST00000614275 531 ntBASIC23.31■■□□□ 1.32
DDX11Q96FC9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX11Q96FC9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
DDX11Q96FC9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 AL390719.1-204ENST00000412397 1219 ntBASIC23.3■■□□□ 1.32
DDX11Q96FC9 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.3■■□□□ 1.32
DDX11Q96FC9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 AC005829.2-201ENST00000571422 1056 ntBASIC23.3■■□□□ 1.32
DDX11Q96FC9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 KRT8P17-201ENST00000453110 1448 ntBASIC23.3■■□□□ 1.32
DDX11Q96FC9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX11Q96FC9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX11Q96FC9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.29■■□□□ 1.32
DDX11Q96FC9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
DDX11Q96FC9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX11Q96FC9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms