Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 HTR7P1-201ENST00000538670 1336 ntBASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ECHDC3Q96DC8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 TUBB8P6-201ENST00000436895 1288 ntBASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ECHDC3Q96DC8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 MIR718-201ENST00000390190 70 ntBASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 RPS2P4-201ENST00000476944 856 ntBASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 AL353708.3-201ENST00000610272 989 ntBASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC3Q96DC8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 AL353807.1-201ENST00000427475 662 ntBASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 AF186192.3-201ENST00000583427 947 ntBASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC3Q96DC8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC3Q96DC8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms