Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM43Q96BQ3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 AL049796.1-201ENST00000565336 1766 ntBASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM43Q96BQ3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 TSPY21P-201ENST00000433481 731 ntBASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 TSPY23P-201ENST00000440136 739 ntBASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 Z98882.1-201ENST00000622160 2253 ntBASIC21.45■■□□□ 1.02
TRIM43Q96BQ3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM43Q96BQ3 AL024507.2-201ENST00000606070 2574 ntBASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 AC083849.1-201ENST00000615227 514 ntBASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 KRT16P6-202ENST00000425692 1426 ntBASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 DPP3P2-201ENST00000416030 1696 ntBASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM43Q96BQ3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 ATP5G2P1-201ENST00000433580 426 ntBASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 AC112907.2-201ENST00000448639 330 ntBASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 HYMAI.1-201ENST00000620949 238 ntBASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM43Q96BQ3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 KRT8P45-201ENST00000414328 1447 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms