Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 CA15P1-201ENST00000481698 905 ntBASIC21.2■□□□□ 0.98
HERVK_113Q902F9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERVK_113Q902F9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 AL049796.1-201ENST00000565336 1766 ntBASIC21.19■□□□□ 0.98
HERVK_113Q902F9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
HERVK_113Q902F9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 AC012313.10-201ENST00000623509 926 ntBASIC21.18■□□□□ 0.98
HERVK_113Q902F9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERVK_113Q902F9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HERVK_113Q902F9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 AC005229.4-201ENST00000610085 2198 ntBASIC21.16■□□□□ 0.98
HERVK_113Q902F9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.16■□□□□ 0.98
HERVK_113Q902F9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HERVK_113Q902F9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERVK_113Q902F9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms