Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MBD3L1Q8WWY6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MBD3L1Q8WWY6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 AC120498.10-201ENST00000621827 505 ntBASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L1Q8WWY6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L1Q8WWY6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
MBD3L1Q8WWY6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L1Q8WWY6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms