Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 HCG11-201ENST00000411553 5696 ntBASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 AC008694.1-202ENST00000636953 945 ntBASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 AC073111.5-205ENST00000641717 521 ntBASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN4IP1Q8WWV3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 AC005181.1-201ENST00000604782 1256 ntBASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN4IP1Q8WWV3 CYP21A1P-202ENST00000354927 1481 ntBASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 AC087633.2-202ENST00000565166 1439 ntBASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.52■□□□□ 0.23
RTN4IP1Q8WWV3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 AC100791.3-201ENST00000617619 330 ntBASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN4IP1Q8WWV3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms