Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNIH3Q8TBE1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CNIH3Q8TBE1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CNIH3Q8TBE1 FZD10-202ENST00000539839 3282 ntBASIC17.96■□□□□ 0.46
CNIH3Q8TBE1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AC135050.7-201ENST00000624508 2218 ntBASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AL355001.2-201ENST00000620617 1191 ntBASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AC006333.2-201ENST00000607957 2099 ntBASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 AC138932.1-201ENST00000534164 6830 ntBASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.95■□□□□ 0.46
CNIH3Q8TBE1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 AIRN-201ENST00000601203 4374 ntBASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.94■□□□□ 0.46
CNIH3Q8TBE1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 AC008406.3-201ENST00000620001 1374 ntBASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 AL358852.1-201ENST00000623174 1268 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms