Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LNX1Q8TBB1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
LNX1Q8TBB1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LNX1Q8TBB1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LNX1Q8TBB1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LNX1Q8TBB1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LNX1Q8TBB1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LNX1Q8TBB1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LNX1Q8TBB1 PTBP1P-201ENST00000554374 1601 ntBASIC21.44■■□□□ 1.02
LNX1Q8TBB1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 AL158211.5-201ENST00000623583 2518 ntBASIC21.44■■□□□ 1.02
LNX1Q8TBB1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.44■■□□□ 1.02
LNX1Q8TBB1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LNX1Q8TBB1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LNX1Q8TBB1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.41■■□□□ 1.02
LNX1Q8TBB1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 AL121829.2-201ENST00000620908 328 ntBASIC21.41■■□□□ 1.02
LNX1Q8TBB1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.41■■□□□ 1.02
LNX1Q8TBB1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LNX1Q8TBB1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms