Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNIP1Q8TAD8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 SLC25A1P2-201ENST00000430693 912 ntBASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 HOMER2P1-201ENST00000455653 964 ntBASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 AC130371.2-201ENST00000619443 611 ntBASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 AC093458.2-201ENST00000623150 629 ntBASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNIP1Q8TAD8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 HCG4P8-203ENST00000443049 980 ntBASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 AL691432.3-201ENST00000621860 400 ntBASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.56■□□□□ 0.56
SNIP1Q8TAD8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AL031432.5-201ENST00000641059 760 ntBASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AC242852.2-201ENST00000615738 1807 ntBASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 AC096733.2-201ENST00000609937 1394 ntBASIC18.55■□□□□ 0.56
SNIP1Q8TAD8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 CLEC4GP1-201ENST00000596555 870 ntBASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 AC141257.4-201ENST00000634557 245 ntBASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 AC136944.6-201ENST00000634818 245 ntBASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNIP1Q8TAD8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms