Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 SOX15-203ENST00000570788 1093 ntBASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 AC120498.8-201ENST00000614275 531 ntBASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH19Q8TAB3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH19Q8TAB3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH19Q8TAB3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH19Q8TAB3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 AC008687.6-201ENST00000596318 630 ntBASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH19Q8TAB3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms