Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 PRKY-204ENST00000533551 1019 ntBASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LPCAT1Q8NF37 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 MTDHP1-201ENST00000605323 784 ntBASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.85■□□□□ 0.77
LPCAT1Q8NF37 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 ITM2C-210ENST00000620962 501 ntBASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT1Q8NF37 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 AL023875.1-201ENST00000640777 796 ntBASIC19.83■□□□□ 0.77
LPCAT1Q8NF37 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT1Q8NF37 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 AP006587.1-201ENST00000534129 1502 ntBASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT1Q8NF37 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LPCAT1Q8NF37 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms