Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.92■■■□□ 2.54
CFAP43Q8NDM7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.92■■■□□ 2.54
CFAP43Q8NDM7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFAP43Q8NDM7 AP005212.1-201ENST00000581547 1997 ntBASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 AC007375.3-201ENST00000600936 2314 ntBASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 AC018553.1-201ENST00000616682 1458 ntBASIC30.91■■■□□ 2.54
CFAP43Q8NDM7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CFAP43Q8NDM7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 FAM207BP-201ENST00000447172 505 ntBASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CFAP43Q8NDM7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CFAP43Q8NDM7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 AL121956.5-201ENST00000625261 221 ntBASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP43Q8NDM7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 TFP1-202ENST00000475455 1573 ntBASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 SLC25A1P4-201ENST00000567977 778 ntBASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 AL138966.2-201ENST00000621997 464 ntBASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CFAP43Q8NDM7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC30.86■■■□□ 2.53
CFAP43Q8NDM7 BX664615.1-201ENST00000443558 458 ntBASIC30.86■■■□□ 2.53
CFAP43Q8NDM7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.86■■■□□ 2.53
CFAP43Q8NDM7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.86■■■□□ 2.53
CFAP43Q8NDM7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.86■■■□□ 2.53
CFAP43Q8NDM7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 AC073314.1-201ENST00000568729 2216 ntBASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 AC116407.4-201ENST00000623319 1061 ntBASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 SMG8-203ENST00000578922 2178 ntBASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CFAP43Q8NDM7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 AC026396.1-201ENST00000419388 421 ntBASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 HCG4P8-203ENST00000443049 980 ntBASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFAP43Q8NDM7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms