Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ABCA6Q8N139 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 SPDYE15P-201ENST00000424157 909 ntBASIC29.31■■■□□ 2.28
ABCA6Q8N139 CA15P1-201ENST00000481698 905 ntBASIC29.31■■■□□ 2.28
ABCA6Q8N139 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 NPAP1P7-201ENST00000613027 823 ntBASIC29.31■■■□□ 2.28
ABCA6Q8N139 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ABCA6Q8N139 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 DERL1-203ENST00000419562 918 ntTSL 2 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC29.31■■■□□ 2.28
ABCA6Q8N139 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA6Q8N139 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA6Q8N139 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA6Q8N139 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA6Q8N139 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 ZNF444P1-201ENST00000559497 298 ntBASIC29.3■■■□□ 2.28
ABCA6Q8N139 HYMAI.1-201ENST00000620949 238 ntBASIC29.3■■■□□ 2.28
ABCA6Q8N139 DFFB-212ENST00000625756 649 ntTSL 5 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC29.3■■■□□ 2.28
ABCA6Q8N139 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ABCA6Q8N139 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 FXN-203ENST00000396366 922 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 ATP5G2P1-201ENST00000433580 426 ntBASIC29.29■■■□□ 2.28
ABCA6Q8N139 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC29.29■■■□□ 2.28
ABCA6Q8N139 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ABCA6Q8N139 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
ABCA6Q8N139 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ABCA6Q8N139 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 AL136038.3-201ENST00000561909 1096 ntBASIC29.27■■■□□ 2.28
ABCA6Q8N139 NDUFV2-AS1-203ENST00000608008 779 ntBASIC29.27■■■□□ 2.28
ABCA6Q8N139 IRF5-214ENST00000613821 595 ntTSL 5 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 TMEM179-206ENST00000616017 1645 ntBASIC29.27■■■□□ 2.28
ABCA6Q8N139 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC29.27■■■□□ 2.28
ABCA6Q8N139 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA6Q8N139 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
ABCA6Q8N139 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC29.26■■■□□ 2.27
ABCA6Q8N139 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.26■■■□□ 2.27
ABCA6Q8N139 PVRIG2P-201ENST00000435460 978 ntBASIC29.26■■■□□ 2.27
ABCA6Q8N139 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC29.26■■■□□ 2.27
ABCA6Q8N139 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA6Q8N139 KRT8P45-201ENST00000414328 1447 ntBASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms