Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AC008622.2-201ENST00000617006 1229 ntBASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AL023803.3-201ENST00000615559 522 ntBASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AC141257.4-201ENST00000634557 245 ntBASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AC136944.6-201ENST00000634818 245 ntBASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL27A1Q8IZC6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 LINC01238-205ENST00000567549 1107 ntBASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 AP000550.4-202ENST00000639755 178 ntBASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL27A1Q8IZC6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 CCR12P-201ENST00000446203 998 ntBASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 AC139887.4-201ENST00000607877 719 ntBASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 AC005332.1-201ENST00000577698 1310 ntBASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL27A1Q8IZC6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 KRT8P41-201ENST00000533985 1514 ntBASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 AC092338.2-201ENST00000568827 1415 ntBASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms