Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX60Q8IY21 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX60Q8IY21 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX60Q8IY21 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.39■■□□□ 1.5
DDX60Q8IY21 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.39■■□□□ 1.5
DDX60Q8IY21 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX60Q8IY21 AC005363.2-201ENST00000618631 242 ntBASIC24.39■■□□□ 1.5
DDX60Q8IY21 AC131212.4-201ENST00000623606 975 ntBASIC24.39■■□□□ 1.5
DDX60Q8IY21 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX60Q8IY21 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX60Q8IY21 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
DDX60Q8IY21 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX60Q8IY21 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX60Q8IY21 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 TSPY14P-201ENST00000303979 915 ntBASIC24.38■■□□□ 1.49
DDX60Q8IY21 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX60Q8IY21 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
DDX60Q8IY21 AP005212.1-201ENST00000581547 1997 ntBASIC24.37■■□□□ 1.49
DDX60Q8IY21 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.37■■□□□ 1.49
DDX60Q8IY21 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 DUX4L26-201ENST00000489078 1255 ntBASIC24.37■■□□□ 1.49
DDX60Q8IY21 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
DDX60Q8IY21 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DDX60Q8IY21 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 AC011298.2-201ENST00000617989 482 ntBASIC24.36■■□□□ 1.49
DDX60Q8IY21 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX60Q8IY21 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX60Q8IY21 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX60Q8IY21 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX60Q8IY21 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX60Q8IY21 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX60Q8IY21 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX60Q8IY21 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
DDX60Q8IY21 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX60Q8IY21 CRYGFP-201ENST00000418459 633 ntBASIC24.34■■□□□ 1.49
DDX60Q8IY21 AC004951.3-201ENST00000418645 1148 ntBASIC24.34■■□□□ 1.49
DDX60Q8IY21 MFAP1P1-201ENST00000442257 1255 ntBASIC24.34■■□□□ 1.49
DDX60Q8IY21 FAM207BP-201ENST00000447172 505 ntBASIC24.34■■□□□ 1.49
DDX60Q8IY21 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.34■■□□□ 1.49
DDX60Q8IY21 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.34■■□□□ 1.49
DDX60Q8IY21 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
DDX60Q8IY21 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.34■■□□□ 1.49
DDX60Q8IY21 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
DDX60Q8IY21 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX60Q8IY21 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX60Q8IY21 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX60Q8IY21 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
DDX60Q8IY21 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX60Q8IY21 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms