Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC28.17■■■□□ 2.1
UBR1Q8IWV7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 TMEM179-206ENST00000616017 1645 ntBASIC28.16■■■□□ 2.1
UBR1Q8IWV7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 SPDYE15P-201ENST00000424157 909 ntBASIC28.16■■■□□ 2.1
UBR1Q8IWV7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBR1Q8IWV7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 PRSS44-201ENST00000515154 1146 ntBASIC28.15■■■□□ 2.1
UBR1Q8IWV7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBR1Q8IWV7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
UBR1Q8IWV7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
UBR1Q8IWV7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
UBR1Q8IWV7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC28.14■■■□□ 2.1
UBR1Q8IWV7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC28.14■■■□□ 2.1
UBR1Q8IWV7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC28.14■■■□□ 2.1
UBR1Q8IWV7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
UBR1Q8IWV7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 KRT16P6-202ENST00000425692 1426 ntBASIC28.13■■■□□ 2.09
UBR1Q8IWV7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.13■■■□□ 2.09
UBR1Q8IWV7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 STARP1-201ENST00000397973 869 ntBASIC28.12■■■□□ 2.09
UBR1Q8IWV7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 KRT8P8-201ENST00000434750 1448 ntBASIC28.12■■■□□ 2.09
UBR1Q8IWV7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 PVRIG2P-201ENST00000435460 978 ntBASIC28.12■■■□□ 2.09
UBR1Q8IWV7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 AL691432.3-201ENST00000621860 400 ntBASIC28.12■■■□□ 2.09
UBR1Q8IWV7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
UBR1Q8IWV7 KRT8P45-201ENST00000414328 1447 ntBASIC28.11■■■□□ 2.09
UBR1Q8IWV7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms