Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.97■■□□□ 1.11
TRIM50Q86XT4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM50Q86XT4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 UNC93B2-201ENST00000285383 730 ntBASIC21.96■■□□□ 1.11
TRIM50Q86XT4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 RCN1P1-201ENST00000400413 996 ntBASIC21.96■■□□□ 1.11
TRIM50Q86XT4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 AC116562.2-201ENST00000507042 360 ntBASIC21.96■■□□□ 1.11
TRIM50Q86XT4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TRIM50Q86XT4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 MIR6786-201ENST00000616843 113 ntBASIC21.95■■□□□ 1.1
TRIM50Q86XT4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 AL391422.3-201ENST00000603791 2761 ntBASIC21.95■■□□□ 1.1
TRIM50Q86XT4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.95■■□□□ 1.1
TRIM50Q86XT4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 AL512408.1-201ENST00000569378 2000 ntBASIC21.94■■□□□ 1.1
TRIM50Q86XT4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 MESTP1-201ENST00000404287 994 ntBASIC21.94■■□□□ 1.1
TRIM50Q86XT4 MIR1224-201ENST00000408193 85 ntBASIC21.94■■□□□ 1.1
TRIM50Q86XT4 TUBB8P6-201ENST00000436895 1288 ntBASIC21.94■■□□□ 1.1
TRIM50Q86XT4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM50Q86XT4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 AL445675.2-201ENST00000620291 557 ntBASIC21.93■■□□□ 1.1
TRIM50Q86XT4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM50Q86XT4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 CYP2D8P-201ENST00000433633 1490 ntBASIC21.92■■□□□ 1.1
TRIM50Q86XT4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.92■■□□□ 1.1
TRIM50Q86XT4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM50Q86XT4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM50Q86XT4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms