Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 AL162412.1-201ENST00000567129 965 ntBASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRTM1Q86UE6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 AC010536.3-201ENST00000620306 533 ntBASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 PHGDH-210ENST00000641115 1638 ntBASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM1Q86UE6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM1Q86UE6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM1Q86UE6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms