Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR3180-1-201ENST00000580374 94 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 MIR3180-3-201ENST00000584616 94 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 AP006587.1-201ENST00000534129 1502 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 AP000692.2-201ENST00000608391 879 ntBASIC13.74□□□□□ -0.21
CSMD3Q7Z407 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 TFP1-202ENST00000475455 1573 ntBASIC13.74□□□□□ -0.21
CSMD3Q7Z407 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 CR769767.2-201ENST00000622735 460 ntBASIC13.74□□□□□ -0.21
CSMD3Q7Z407 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD3Q7Z407 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 SPDYE13P-201ENST00000445314 798 ntBASIC13.73□□□□□ -0.21
CSMD3Q7Z407 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 AF106564.1-201ENST00000607058 2553 ntBASIC13.73□□□□□ -0.21
CSMD3Q7Z407 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 AL441883.1-201ENST00000566170 1045 ntBASIC13.73□□□□□ -0.21
CSMD3Q7Z407 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD3Q7Z407 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.72□□□□□ -0.21
CSMD3Q7Z407 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD3Q7Z407 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms