Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF111Q6ZNA4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF111Q6ZNA4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF111Q6ZNA4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 MKRN4P-201ENST00000444706 1521 ntBASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 AC010980.2-201ENST00000587099 1412 ntBASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF111Q6ZNA4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF111Q6ZNA4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 PGM5P4-201ENST00000421970 445 ntBASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 AL109923.1-201ENST00000618799 583 ntBASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF111Q6ZNA4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF111Q6ZNA4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF111Q6ZNA4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms