Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 FER1L4-210ENST00000615531 5998 ntBASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ID1-201ENST00000376105 1233 ntBASIC17.09■□□□□ 0.33
C11orf88Q6PI97 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 AC092720.2-201ENST00000602388 1665 ntBASIC17.09■□□□□ 0.33
C11orf88Q6PI97 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 AC125437.2-201ENST00000625180 2167 ntBASIC17.09■□□□□ 0.33
C11orf88Q6PI97 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C11orf88Q6PI97 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 AC005332.7-201ENST00000614046 2005 ntBASIC17.08■□□□□ 0.33
C11orf88Q6PI97 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf88Q6PI97 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 AC005224.4-201ENST00000583262 1652 ntBASIC17.08■□□□□ 0.32
C11orf88Q6PI97 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf88Q6PI97 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 AC079140.4-201ENST00000507448 529 ntBASIC17.07■□□□□ 0.32
C11orf88Q6PI97 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.07■□□□□ 0.32
C11orf88Q6PI97 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf88Q6PI97 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 AP004607.4-201ENST00000530158 1459 ntBASIC17.06■□□□□ 0.32
C11orf88Q6PI97 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.06■□□□□ 0.32
C11orf88Q6PI97 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms