Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 FEM1AP1-201ENST00000431297 1995 ntBASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PRPF40BQ6NWY9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PRPF40BQ6NWY9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 HLA-G-202ENST00000376815 851 ntBASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 HLA-G-203ENST00000376818 1127 ntBASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 LIN28AP1-201ENST00000429574 405 ntBASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 AL031985.4-201ENST00000642138 673 ntBASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.67■■□□□ 1.54
PRPF40BQ6NWY9 LINC01006-201ENST00000333319 2292 ntBASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRPF40BQ6NWY9 AC007225.1-201ENST00000566331 1836 ntBASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 AC092667.1-201ENST00000434301 2586 ntBASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 ATP5G1P1-201ENST00000448724 379 ntBASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 ECEL1P2-202ENST00000465689 757 ntBASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 C2orf69P3-201ENST00000565542 1120 ntBASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
PRPF40BQ6NWY9 FP700111.2-201ENST00000619190 1892 ntBASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.54
PRPF40BQ6NWY9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PRPF40BQ6NWY9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PRPF40BQ6NWY9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PRPF40BQ6NWY9 FSCN1P1-201ENST00000568912 1481 ntBASIC24.64■■□□□ 1.53
PRPF40BQ6NWY9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms