Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 AL117328.2-201ENST00000624617 1940 ntBASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 AC007663.1-201ENST00000438948 1240 ntBASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 AP000550.4-202ENST00000639755 178 ntBASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYSMD4Q5XG99 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 KRT18P56-201ENST00000507275 550 ntBASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LYSMD4Q5XG99 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 AC141257.4-201ENST00000634557 245 ntBASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 AC136944.6-201ENST00000634818 245 ntBASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYSMD4Q5XG99 AC092338.2-201ENST00000568827 1415 ntBASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 AL512604.3-201ENST00000569583 964 ntBASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LYSMD4Q5XG99 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 AC092720.2-201ENST00000602388 1665 ntBASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.33■□□□□ 0.69
LYSMD4Q5XG99 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD4Q5XG99 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms