Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
CCDC18Q5T9S5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC18Q5T9S5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 SLC25A1P4-201ENST00000567977 778 ntBASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
CCDC18Q5T9S5 HMGA1P5-201ENST00000412453 271 ntBASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 AC091390.4-202ENST00000476426 537 ntBASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
CCDC18Q5T9S5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
CCDC18Q5T9S5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.51■■■□□ 2.47
CCDC18Q5T9S5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC18Q5T9S5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
CCDC18Q5T9S5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
CCDC18Q5T9S5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC130371.2-201ENST00000619443 611 ntBASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC104076.2-201ENST00000448912 469 ntBASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC022616.7-201ENST00000525383 220 ntBASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC18Q5T9S5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC18Q5T9S5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 FEM1AP1-201ENST00000431297 1995 ntBASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC18Q5T9S5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 SLC25A1P2-201ENST00000430693 912 ntBASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 WWOX-216ENST00000569818 525 ntBASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC30.47■■■□□ 2.47
CCDC18Q5T9S5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.46■■■□□ 2.47
CCDC18Q5T9S5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms