Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 AL591742.1-201ENST00000604433 565 ntBASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00242Q5T6M2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 CROCCP3-202ENST00000420820 1947 ntBASIC13.43□□□□□ -0.26
LINC00242Q5T6M2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 AC138932.1-201ENST00000534164 6830 ntBASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 KRT19P1-201ENST00000405746 1186 ntBASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 UBE2DNL-204ENST00000602536 740 ntBASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 AL139246.5-201ENST00000606645 996 ntBASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 PHGDH-210ENST00000641115 1638 ntBASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms