Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01554Q52M75 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LINC01554Q52M75 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 IDNK-201ENST00000376417 511 ntTSL 5 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 AC087742.1-201ENST00000575880 1738 ntBASIC9.86□□□□□ -0.83
LINC01554Q52M75 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PVT1_1.1-201ENST00000615125 194 ntBASIC9.86□□□□□ -0.83
LINC01554Q52M75 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
LINC01554Q52M75 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LINC01554Q52M75 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 AC005703.6-201ENST00000623265 1329 ntBASIC9.85□□□□□ -0.83
LINC01554Q52M75 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms