Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFX7Q2KHR2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 NBPF21P-201ENST00000425093 1451 ntBASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 AF186192.3-201ENST00000583427 947 ntBASIC23.87■■□□□ 1.41
RFX7Q2KHR2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFX7Q2KHR2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 KRT17P2-201ENST00000300992 1314 ntBASIC23.86■■□□□ 1.41
RFX7Q2KHR2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 AC211429.1-201ENST00000415277 523 ntBASIC23.86■■□□□ 1.41
RFX7Q2KHR2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.86■■□□□ 1.41
RFX7Q2KHR2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 AC012306.2-201ENST00000609350 630 ntBASIC23.85■■□□□ 1.41
RFX7Q2KHR2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.85■■□□□ 1.41
RFX7Q2KHR2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 HTR7P1-201ENST00000538670 1336 ntBASIC23.84■■□□□ 1.41
RFX7Q2KHR2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 AC087499.1-201ENST00000418141 1075 ntBASIC23.84■■□□□ 1.41
RFX7Q2KHR2 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.84■■□□□ 1.41
RFX7Q2KHR2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFX7Q2KHR2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RFX7Q2KHR2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms