Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM6P62312 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LSM6P62312 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LSM6P62312 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM6P62312 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.29■□□□□ 0.36
LSM6P62312 AC098934.4-201ENST00000564127 592 ntBASIC17.29■□□□□ 0.36
LSM6P62312 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
LSM6P62312 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM6P62312 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM6P62312 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.28■□□□□ 0.36
LSM6P62312 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM6P62312 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM6P62312 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM6P62312 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LSM6P62312 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LSM6P62312 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.28■□□□□ 0.36
LSM6P62312 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.28■□□□□ 0.36
LSM6P62312 RPS2P52-201ENST00000469610 820 ntBASIC17.28■□□□□ 0.36
LSM6P62312 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.28■□□□□ 0.36
LSM6P62312 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.28■□□□□ 0.36
LSM6P62312 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM6P62312 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LSM6P62312 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM6P62312 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LSM6P62312 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
LSM6P62312 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LSM6P62312 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM6P62312 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM6P62312 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.27■□□□□ 0.36
LSM6P62312 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.27■□□□□ 0.36
LSM6P62312 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 AL121906.2-201ENST00000621597 723 ntBASIC17.27■□□□□ 0.36
LSM6P62312 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM6P62312 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM6P62312 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LSM6P62312 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.27■□□□□ 0.35
LSM6P62312 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LSM6P62312 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSM6P62312 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.26■□□□□ 0.35
LSM6P62312 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM6P62312 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSM6P62312 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.26■□□□□ 0.35
LSM6P62312 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.26■□□□□ 0.35
LSM6P62312 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.26■□□□□ 0.35
LSM6P62312 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 AC120498.8-201ENST00000614275 531 ntBASIC17.26■□□□□ 0.35
LSM6P62312 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.26■□□□□ 0.35
LSM6P62312 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSM6P62312 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM6P62312 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LSM6P62312 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
LSM6P62312 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.25■□□□□ 0.35
LSM6P62312 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSM6P62312 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM6P62312 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.25■□□□□ 0.35
LSM6P62312 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSM6P62312 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LSM6P62312 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.25■□□□□ 0.35
LSM6P62312 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM6P62312 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms