Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDC42P60953 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC42P60953 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC42P60953 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 KRT8P17-201ENST00000453110 1448 ntBASIC17.98■□□□□ 0.47
CDC42P60953 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC42P60953 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDC42P60953 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDC42P60953 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.97■□□□□ 0.47
CDC42P60953 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.97■□□□□ 0.47
CDC42P60953 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.97■□□□□ 0.47
CDC42P60953 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.97■□□□□ 0.47
CDC42P60953 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC42P60953 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDC42P60953 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
CDC42P60953 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDC42P60953 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC42P60953 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC42P60953 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDC42P60953 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC42P60953 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC42P60953 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC42P60953 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.96■□□□□ 0.47
CDC42P60953 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.96■□□□□ 0.47
CDC42P60953 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDC42P60953 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDC42P60953 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.96■□□□□ 0.47
CDC42P60953 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CDC42P60953 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC42P60953 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC42P60953 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.95■□□□□ 0.46
CDC42P60953 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDC42P60953 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDC42P60953 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC42P60953 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC42P60953 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDC42P60953 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 LINC02228-203ENST00000641970 1355 ntBASIC17.94■□□□□ 0.46
CDC42P60953 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC42P60953 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDC42P60953 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.94■□□□□ 0.46
CDC42P60953 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.94■□□□□ 0.46
CDC42P60953 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDC42P60953 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDC42P60953 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms