Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ATXN3P54252 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN3P54252 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.04■□□□□ 0.8
ATXN3P54252 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3P54252 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3P54252 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN3P54252 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATXN3P54252 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3P54252 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.04■□□□□ 0.8
ATXN3P54252 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3P54252 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.04■□□□□ 0.8
ATXN3P54252 GABARAPL3-202ENST00000624044 1851 ntBASIC20.04■□□□□ 0.8
ATXN3P54252 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
ATXN3P54252 AC112907.3-201ENST00000577781 2400 ntBASIC20.04■□□□□ 0.8
ATXN3P54252 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3P54252 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATXN3P54252 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.03■□□□□ 0.8
ATXN3P54252 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.03■□□□□ 0.8
ATXN3P54252 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.03■□□□□ 0.8
ATXN3P54252 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATXN3P54252 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.03■□□□□ 0.8
ATXN3P54252 AL445228.2-201ENST00000605589 952 ntBASIC20.03■□□□□ 0.8
ATXN3P54252 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.03■□□□□ 0.8
ATXN3P54252 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATXN3P54252 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.03■□□□□ 0.8
ATXN3P54252 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATXN3P54252 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN3P54252 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATXN3P54252 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATXN3P54252 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATXN3P54252 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.02■□□□□ 0.8
ATXN3P54252 ARMC10P1-201ENST00000313754 855 ntBASIC20.02■□□□□ 0.8
ATXN3P54252 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.02■□□□□ 0.8
ATXN3P54252 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.02■□□□□ 0.8
ATXN3P54252 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATXN3P54252 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATXN3P54252 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.02■□□□□ 0.79
ATXN3P54252 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.02■□□□□ 0.79
ATXN3P54252 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.02■□□□□ 0.79
ATXN3P54252 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATXN3P54252 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.02■□□□□ 0.79
ATXN3P54252 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATXN3P54252 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATXN3P54252 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATXN3P54252 PLK5-205ENST00000642079 1969 ntBASIC20.01■□□□□ 0.79
ATXN3P54252 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATXN3P54252 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
ATXN3P54252 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.01■□□□□ 0.79
ATXN3P54252 MMP23A-201ENST00000234610 1017 ntBASIC20.01■□□□□ 0.79
ATXN3P54252 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms