Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLCN2P51788 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.01■□□□□ 0.63
CLCN2P51788 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCN2P51788 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCN2P51788 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCN2P51788 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCN2P51788 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCN2P51788 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN2P51788 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLCN2P51788 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
CLCN2P51788 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19■□□□□ 0.63
CLCN2P51788 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19■□□□□ 0.63
CLCN2P51788 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19■□□□□ 0.63
CLCN2P51788 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 HES2-205ENST00000487437 968 ntTSL 3 BASIC19■□□□□ 0.63
CLCN2P51788 CD99P1-205ENST00000527459 561 ntBASIC19■□□□□ 0.63
CLCN2P51788 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19■□□□□ 0.63
CLCN2P51788 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 MYC-209ENST00000641252 345 ntBASIC19■□□□□ 0.63
CLCN2P51788 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN2P51788 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19■□□□□ 0.63
CLCN2P51788 Z82202.1-201ENST00000623446 1880 ntBASIC19■□□□□ 0.63
CLCN2P51788 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CLCN2P51788 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19■□□□□ 0.63
CLCN2P51788 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19■□□□□ 0.63
CLCN2P51788 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CLCN2P51788 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19■□□□□ 0.63
CLCN2P51788 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CLCN2P51788 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.99■□□□□ 0.63
CLCN2P51788 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.99■□□□□ 0.63
CLCN2P51788 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.99■□□□□ 0.63
CLCN2P51788 AC105020.6-201ENST00000621523 1217 ntBASIC18.99■□□□□ 0.63
CLCN2P51788 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLCN2P51788 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLCN2P51788 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCN2P51788 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN2P51788 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLCN2P51788 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCN2P51788 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN2P51788 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN2P51788 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLCN2P51788 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCN2P51788 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLCN2P51788 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN2P51788 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.98■□□□□ 0.63
CLCN2P51788 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CLCN2P51788 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN2P51788 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.98■□□□□ 0.63
CLCN2P51788 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.98■□□□□ 0.63
CLCN2P51788 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCN2P51788 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN2P51788 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.98■□□□□ 0.63
CLCN2P51788 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN2P51788 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN2P51788 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CLCN2P51788 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLCN2P51788 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCN2P51788 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms