Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 MIR718-201ENST00000390190 70 ntBASIC19.78■□□□□ 0.76
CSNK1DP48730 RPS2P55-201ENST00000397318 883 ntBASIC19.78■□□□□ 0.76
CSNK1DP48730 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.78■□□□□ 0.76
CSNK1DP48730 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 AC107956.1-201ENST00000494359 873 ntBASIC19.78■□□□□ 0.76
CSNK1DP48730 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CSNK1DP48730 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 AC233702.5-201ENST00000584107 538 ntBASIC19.78■□□□□ 0.76
CSNK1DP48730 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.78■□□□□ 0.76
CSNK1DP48730 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1DP48730 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.78■□□□□ 0.76
CSNK1DP48730 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.78■□□□□ 0.76
CSNK1DP48730 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CSNK1DP48730 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1DP48730 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1DP48730 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1DP48730 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.77■□□□□ 0.76
CSNK1DP48730 AP001412.1-201ENST00000608405 714 ntBASIC19.77■□□□□ 0.76
CSNK1DP48730 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.77■□□□□ 0.76
CSNK1DP48730 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1DP48730 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1DP48730 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.77■□□□□ 0.75
CSNK1DP48730 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CSNK1DP48730 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
CSNK1DP48730 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
CSNK1DP48730 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.76■□□□□ 0.75
CSNK1DP48730 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.76■□□□□ 0.75
CSNK1DP48730 AF186192.3-201ENST00000583427 947 ntBASIC19.76■□□□□ 0.75
CSNK1DP48730 Z99916.2-201ENST00000604037 246 ntBASIC19.76■□□□□ 0.75
CSNK1DP48730 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1DP48730 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.76■□□□□ 0.75
CSNK1DP48730 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1DP48730 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CSNK1DP48730 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CSNK1DP48730 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.75■□□□□ 0.75
CSNK1DP48730 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CSNK1DP48730 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CSNK1DP48730 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.75■□□□□ 0.75
CSNK1DP48730 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.75■□□□□ 0.75
CSNK1DP48730 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
CSNK1DP48730 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1DP48730 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms