Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
GABRA4P48169 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.69■□□□□ 0.58
GABRA4P48169 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.69■□□□□ 0.58
GABRA4P48169 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA4P48169 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA4P48169 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA4P48169 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.69■□□□□ 0.58
GABRA4P48169 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GABRA4P48169 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.69■□□□□ 0.58
GABRA4P48169 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.69■□□□□ 0.58
GABRA4P48169 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA4P48169 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GABRA4P48169 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.68■□□□□ 0.58
GABRA4P48169 AL355075.4-201ENST00000554988 638 ntBASIC18.68■□□□□ 0.58
GABRA4P48169 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.68■□□□□ 0.58
GABRA4P48169 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA4P48169 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA4P48169 TCF3P1-201ENST00000423021 1937 ntBASIC18.68■□□□□ 0.58
GABRA4P48169 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA4P48169 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
GABRA4P48169 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.67■□□□□ 0.58
GABRA4P48169 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GABRA4P48169 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GABRA4P48169 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRA4P48169 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRA4P48169 AP003071.4-201ENST00000562276 1284 ntBASIC18.67■□□□□ 0.58
GABRA4P48169 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 AL445675.2-201ENST00000620291 557 ntBASIC18.67■□□□□ 0.58
GABRA4P48169 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRA4P48169 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
GABRA4P48169 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA4P48169 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRA4P48169 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRA4P48169 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GABRA4P48169 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.66■□□□□ 0.58
GABRA4P48169 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.66■□□□□ 0.58
GABRA4P48169 NUDT16P1-203ENST00000513809 620 ntBASIC18.66■□□□□ 0.58
GABRA4P48169 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRA4P48169 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRA4P48169 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.66■□□□□ 0.58
GABRA4P48169 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.66■□□□□ 0.58
GABRA4P48169 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.66■□□□□ 0.58
GABRA4P48169 CR392000.1-201ENST00000624770 1228 ntBASIC18.66■□□□□ 0.58
GABRA4P48169 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRA4P48169 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
GABRA4P48169 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GABRA4P48169 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA4P48169 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA4P48169 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms