Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC1P35251 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RFC1P35251 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
RFC1P35251 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC1P35251 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RFC1P35251 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC1P35251 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.72■□□□□ 0.91
RFC1P35251 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.72■□□□□ 0.91
RFC1P35251 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC1P35251 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.71■□□□□ 0.91
RFC1P35251 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
RFC1P35251 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC1P35251 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.71■□□□□ 0.91
RFC1P35251 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.71■□□□□ 0.91
RFC1P35251 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RFC1P35251 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.71■□□□□ 0.91
RFC1P35251 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFC1P35251 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFC1P35251 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC1P35251 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RFC1P35251 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RFC1P35251 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC1P35251 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC1P35251 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFC1P35251 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFC1P35251 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC1P35251 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RFC1P35251 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RFC1P35251 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 SOX15-203ENST00000570788 1093 ntBASIC20.7■□□□□ 0.9
RFC1P35251 TFP1-202ENST00000475455 1573 ntBASIC20.7■□□□□ 0.9
RFC1P35251 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFC1P35251 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RFC1P35251 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC1P35251 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RFC1P35251 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC1P35251 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.69■□□□□ 0.9
RFC1P35251 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC1P35251 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC1P35251 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RFC1P35251 AC120498.8-201ENST00000614275 531 ntBASIC20.69■□□□□ 0.9
RFC1P35251 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC1P35251 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC1P35251 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFC1P35251 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RFC1P35251 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.68■□□□□ 0.9
RFC1P35251 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms