Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA3P32297 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHRNA3P32297 Z82202.1-201ENST00000623446 1880 ntBASIC20.71■□□□□ 0.91
CHRNA3P32297 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHRNA3P32297 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHRNA3P32297 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA3P32297 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CHRNA3P32297 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNA3P32297 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNA3P32297 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CHRNA3P32297 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNA3P32297 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHRNA3P32297 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA3P32297 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA3P32297 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHRNA3P32297 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA3P32297 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.69■□□□□ 0.9
CHRNA3P32297 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.69■□□□□ 0.9
CHRNA3P32297 AC105020.6-201ENST00000621523 1217 ntBASIC20.69■□□□□ 0.9
CHRNA3P32297 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHRNA3P32297 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA3P32297 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA3P32297 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHRNA3P32297 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA3P32297 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNA3P32297 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CHRNA3P32297 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHRNA3P32297 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.68■□□□□ 0.9
CHRNA3P32297 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA3P32297 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.68■□□□□ 0.9
CHRNA3P32297 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHRNA3P32297 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHRNA3P32297 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA3P32297 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRNA3P32297 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CHRNA3P32297 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNA3P32297 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHRNA3P32297 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNA3P32297 FAM201B-201ENST00000458407 597 ntBASIC20.67■□□□□ 0.9
CHRNA3P32297 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.67■□□□□ 0.9
CHRNA3P32297 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.67■□□□□ 0.9
CHRNA3P32297 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHRNA3P32297 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.67■□□□□ 0.9
CHRNA3P32297 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms