Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC8P31273 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HOXC8P31273 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.58■■□□□ 1.05
HOXC8P31273 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.58■■□□□ 1.05
HOXC8P31273 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.58■■□□□ 1.05
HOXC8P31273 SLC25A1P4-201ENST00000567977 778 ntBASIC21.58■■□□□ 1.05
HOXC8P31273 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.58■■□□□ 1.04
HOXC8P31273 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
HOXC8P31273 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
HOXC8P31273 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HOXC8P31273 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC8P31273 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.57■■□□□ 1.04
HOXC8P31273 MFAP1P1-201ENST00000442257 1255 ntBASIC21.57■■□□□ 1.04
HOXC8P31273 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.57■■□□□ 1.04
HOXC8P31273 AC128688.1-201ENST00000487626 519 ntBASIC21.57■■□□□ 1.04
HOXC8P31273 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
HOXC8P31273 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
HOXC8P31273 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HOXC8P31273 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
HOXC8P31273 FAM207BP-201ENST00000447172 505 ntBASIC21.56■■□□□ 1.04
HOXC8P31273 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC8P31273 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.56■■□□□ 1.04
HOXC8P31273 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.56■■□□□ 1.04
HOXC8P31273 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.56■■□□□ 1.04
HOXC8P31273 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.56■■□□□ 1.04
HOXC8P31273 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HOXC8P31273 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HOXC8P31273 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
HOXC8P31273 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HOXC8P31273 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
HOXC8P31273 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 AC020907.5-201ENST00000624372 1936 ntBASIC21.55■■□□□ 1.04
HOXC8P31273 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.55■■□□□ 1.04
HOXC8P31273 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
HOXC8P31273 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
HOXC8P31273 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.55■■□□□ 1.04
HOXC8P31273 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HOXC8P31273 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HOXC8P31273 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC8P31273 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 SLC25A1P2-201ENST00000430693 912 ntBASIC21.54■■□□□ 1.04
HOXC8P31273 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC8P31273 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
HOXC8P31273 NTF6B-201ENST00000591913 560 ntBASIC21.54■■□□□ 1.04
HOXC8P31273 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
HOXC8P31273 AL138966.2-201ENST00000621997 464 ntBASIC21.54■■□□□ 1.04
HOXC8P31273 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
HOXC8P31273 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HOXC8P31273 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 FEM1AP1-201ENST00000431297 1995 ntBASIC21.54■■□□□ 1.04
HOXC8P31273 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.54■■□□□ 1.04
HOXC8P31273 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HOXC8P31273 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HOXC8P31273 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 HMGA1P5-201ENST00000412453 271 ntBASIC21.53■■□□□ 1.04
HOXC8P31273 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 WWOX-216ENST00000569818 525 ntBASIC21.53■■□□□ 1.04
HOXC8P31273 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.53■■□□□ 1.04
HOXC8P31273 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HOXC8P31273 AL023803.3-201ENST00000615559 522 ntBASIC21.53■■□□□ 1.04
HOXC8P31273 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.53■■□□□ 1.04
HOXC8P31273 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.53■■□□□ 1.04
HOXC8P31273 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms