Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TMEM179-206ENST00000616017 1645 ntBASIC18.16■□□□□ 0.5
ABCD3P28288 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ABCD3P28288 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 NBPF21P-201ENST00000425093 1451 ntBASIC18.15■□□□□ 0.5
ABCD3P28288 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.15■□□□□ 0.5
ABCD3P28288 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ABCD3P28288 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ABCD3P28288 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
ABCD3P28288 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
ABCD3P28288 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCD3P28288 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ABCD3P28288 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.14■□□□□ 0.5
ABCD3P28288 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ABCD3P28288 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ABCD3P28288 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
ABCD3P28288 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ABCD3P28288 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ABCD3P28288 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ABCD3P28288 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.14■□□□□ 0.49
ABCD3P28288 AL158047.1-201ENST00000445918 881 ntBASIC18.14■□□□□ 0.49
ABCD3P28288 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCD3P28288 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCD3P28288 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.14■□□□□ 0.49
ABCD3P28288 FAM197Y4-202ENST00000622692 608 ntBASIC18.14■□□□□ 0.49
ABCD3P28288 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ABCD3P28288 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ABCD3P28288 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCD3P28288 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCD3P28288 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ABCD3P28288 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.13■□□□□ 0.49
ABCD3P28288 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCD3P28288 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCD3P28288 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.13■□□□□ 0.49
ABCD3P28288 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 AC110285.5-201ENST00000611501 352 ntBASIC18.13■□□□□ 0.49
ABCD3P28288 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.13■□□□□ 0.49
ABCD3P28288 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCD3P28288 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ABCD3P28288 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCD3P28288 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ABCD3P28288 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ABCD3P28288 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
ABCD3P28288 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ABCD3P28288 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCD3P28288 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.12■□□□□ 0.49
ABCD3P28288 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.12■□□□□ 0.49
ABCD3P28288 YBX1P10-201ENST00000444752 975 ntBASIC18.12■□□□□ 0.49
ABCD3P28288 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCD3P28288 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCD3P28288 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ABCD3P28288 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms