Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYN1P17600 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.51■■□□□ 1.03
SYN1P17600 AL022342.1-201ENST00000400363 863 ntBASIC21.51■■□□□ 1.03
SYN1P17600 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.51■■□□□ 1.03
SYN1P17600 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.51■■□□□ 1.03
SYN1P17600 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
SYN1P17600 KRT8P17-201ENST00000453110 1448 ntBASIC21.51■■□□□ 1.03
SYN1P17600 LINC01311-201ENST00000565162 1445 ntBASIC21.51■■□□□ 1.03
SYN1P17600 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
SYN1P17600 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.51■■□□□ 1.03
SYN1P17600 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
SYN1P17600 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYN1P17600 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYN1P17600 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SYN1P17600 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.5■■□□□ 1.03
SYN1P17600 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.5■■□□□ 1.03
SYN1P17600 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SYN1P17600 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
SYN1P17600 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.5■■□□□ 1.03
SYN1P17600 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.5■■□□□ 1.03
SYN1P17600 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
SYN1P17600 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SYN1P17600 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SYN1P17600 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.5■■□□□ 1.03
SYN1P17600 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.5■■□□□ 1.03
SYN1P17600 HYMAI.1-201ENST00000620949 238 ntBASIC21.5■■□□□ 1.03
SYN1P17600 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.5■■□□□ 1.03
SYN1P17600 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYN1P17600 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.49■■□□□ 1.03
SYN1P17600 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.49■■□□□ 1.03
SYN1P17600 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
SYN1P17600 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SYN1P17600 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 AC009078.2-202ENST00000463353 338 ntBASIC21.49■■□□□ 1.03
SYN1P17600 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.49■■□□□ 1.03
SYN1P17600 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.49■■□□□ 1.03
SYN1P17600 AC092329.2-201ENST00000598402 547 ntBASIC21.49■■□□□ 1.03
SYN1P17600 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.49■■□□□ 1.03
SYN1P17600 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.49■■□□□ 1.03
SYN1P17600 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.49■■□□□ 1.03
SYN1P17600 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYN1P17600 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.48■■□□□ 1.03
SYN1P17600 TFP1-202ENST00000475455 1573 ntBASIC21.48■■□□□ 1.03
SYN1P17600 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.48■■□□□ 1.03
SYN1P17600 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.48■■□□□ 1.03
SYN1P17600 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SYN1P17600 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SYN1P17600 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.48■■□□□ 1.03
SYN1P17600 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.48■■□□□ 1.03
SYN1P17600 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SYN1P17600 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SYN1P17600 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 AC116351.2-201ENST00000606540 1585 ntBASIC21.48■■□□□ 1.03
SYN1P17600 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYN1P17600 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.47■■□□□ 1.03
SYN1P17600 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
SYN1P17600 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.47■■□□□ 1.03
SYN1P17600 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms